PhD: Statistical physics of chromosomes

1 week geleden


Amsterdam, Noord-Holland, Nederland VU Amsterdam Voltijd

Your function

Our theory group is a worldwide leader in studying the statistical physics of living systems, ranging from chromosomes to migrating cells and multicellular tissues. We aim to understand the emergent functional dynamics and organization of living systems in close collaboration with various experimental labs. We currently have an opening for an ERC funded 4-year PhD position.

We are looking for highly motivated applicants for a PhD student to strengthen our research team in an interactive and

collaborative environment.

ERC funded Project: Learn4DChromosome

The physical organization of bacterial chromosomes is inherently variable, with large conformational fluctuations both from cell to cell and over time. Yet, chromosomes must also be structured to facilitate processes such as transcription, replication, and segregation. In this project, you will combine data-driven theoretical methods with mechanistic models to unravel the statistical folding of chromosomes. You will use approaches grounded in equilibrium and non-equilibrium statistical physics, information theory, and soft condensed matter physics. Your work will be performed in close collaboration with several experimental groups. Finally, you will also play a role in supervising students and the tutorial classes in our teaching program.

Your profile

MSc Degree in PhysicsPreferably with a background in theoretical physics, statistical, soft or biological physicsExperience with using inference/machine learning tools and basic programming is a plus

As a university, we strive for equal opportunities for all, recognising that diversity takes many forms. We believe that diversity in all its complexity is invaluable for the quality of our teaching, research and service. We are always looking for talent with diverse backgrounds and experiences. This also means that we are committed to creating an inclusive community so that we can use diversity as an asset.

We realise that each individual brings a unique set of skills, expertise and mindset. Therefore we are happy to invite anyone who recognises themselves in the profile to apply, even if you do not meet all the requirements.

What do we offer?

We offer guidance and help so you can develop the skills and experience to become an independent scientist. In addition, we offer an intellectually challenging position in a socially engaged organisation. At VU Amsterdam, you contribute to education, research and service for a better world. And that is valuable. So in return for your efforts, we offer you:

a salary of € 2.,00 (PhD) and maximum € 3.,00 (PhD) gross per month in the fourth year, for a full-time employmentThe appointment will initially be for 1 year. After a satisfactory evaluation of the initial appointment, the contract will be extended for a total duration of 4 years.

We also offer you attractive fringe benefits and arrangements. Some examples:

A full-time 38-hour working week comes with a holiday leave entitlement of hours per year. If you choose to work 40 hours, you have 96 extra holiday leave hours on an annual basis. For part-timers, this is calculated pro rata.8% holiday allowance and 8.3% end-of-year bonuscontribution to commuting expensesdiscount on (and occasionally exclusive access to) theater performances and courses at the Griffioen Cultural Centera wide range of sports facilities which staff may use at a modest charge

  • Amsterdam, Noord-Holland, Nederland Vrije Universiteit Amsterdam Voltijd

    The Broedersz group (Theoretical physics of life) has an ERC funded opening for a four-year PhD student position on the statistical physics of chromosomes.Your functionOur theory group is a worldwide leader in studying the statistical physics of living systems, ranging from chromosomes to migrating cells and multicellular tissues. We aim to understand the...


  • Amsterdam, Noord-Holland, Nederland VU Amsterdam Voltijd

    Your functionOur theory group is a worldwide leader in studying the statistical physics of living systems, ranging from chromosomes to migrating cells and multicellular tissues. We aim to understand the emergent functional dynamics and organization of living systems in close collaboration with various experimental labs. We currently have an opening for an...


  • Amsterdam, Noord-Holland, Nederland Universiteit van Amsterdam Voltijd

    What will be your responsibilities?You will be conducting research in network modeling based on graph theory and population balances, mathematical tools that describe molecular changes on a coarse-grained level. The Random Graph approach is being enhanced to better consider topological features that influence molecular mobility and affect reaction...


  • Amsterdam, Noord-Holland, Nederland Universiteit van Amsterdam Voltijd

    Faculteit/Dienst:Faculteit der Natuurw, Wiskunde & InformaticaOpleidingsniveau:MasterFunctie type:PromotieplaatsSluitingsdatum:30 June 2024Vacaturenummer:13023-What are you going to do? You will study the structure and structure-property relationship of proteins assembled under various conditions of shear and extrusion, inducing an anisotropic "filamentous"...


  • Amsterdam, Noord-Holland, Nederland AMOLF Voltijd

    PhD-student: Nanophotonics and quantum physics with electrons and lightWork ActivitiesDid you know high-energy electrons can serve as efficient sources of optical excitation of matter? Our group has developed cathodoluminescence microscopy, in which we use 1-30 keV electrons in a scanning electron microscope (SEM) to excite nanomaterials. The oscillating...


  • Amsterdam, Noord-Holland, Nederland AMOLF Voltijd

    PhD-position: Quantum nano-optomechanicsWork ActivitiesThe Photonic Forces group at AMOLF is looking for PhD students to join our team working on the intriguing physics of nano-optomechanical systems. We are fascinated by the ability of light to measure and control mechanical motion in new and powerful ways. We seek to challenge the limits of mechanical...


  • Amsterdam, Noord-Holland, Nederland Universiteit van Amsterdam Voltijd

    What are you going to do ? You are expected to carry out creative and fundamental research on collective behavior of active polymers combining analytical and computational approaches. You will: Perform Brownian dynamics of interacting active filaments; Develop a new density functional theory for prediction of Isotropic-nematic transition in active...

  • PhD: Fano4nano

    1 week geleden


    Amsterdam, Noord-Holland, Nederland AMOLF Voltijd

    Two PhD positions: Fano4nano - Fano resonance enhanced scatterometry for wafer metrologyWork ActivitiesAre you looking for a challenging project in which you develop fundamental advances in metaphotonics and work with high-tech industry to apply them? In this project we aim to develop nanophotonic structures for application in high-precision semiconductor...

  • Physics Teacher

    1 dag geleden


    Amsterdam, Noord-Holland, Nederland The British School of Amsterdam Voltijd

    We are seeking a dynamic Science Teacher with a passion for Physics, to join the Senior School teaching team. The post holder will be responsible for teaching Physics at KS3, KS4, and KS5 (A Level), and Science at KS3, and will be expected to deliver high quality lessons while supporting students to achieve their best. The role will also involve working as a...


  • Amsterdam, Noord-Holland, Nederland ARCNL Voltijd

    Work ActivitiesMaterials are ubiquitous parts of our everyday life and as technologies keep pushing boundaries, the search for new functional materials is getting more and more complex. In this PhD project, you will investigate and design 2D materials with applications in energy storage, semiconductors, and nanolithography. Until now, most research studies...


  • Amsterdam, Noord-Holland, Nederland ARCNL Voltijd

    Work ActivitiesThe goal of the project is to learn more about the possible detrimental effects of electrons in scanning electron microscopy for metrology applications, on materials used in the semiconductor industry. As a PhD student you will use state of the art tools to unravel and quantify the physical and chemical changes at surfaces and within layers...


  • Amsterdam, Noord-Holland, Nederland AMOLF Voltijd

    PhD: Non-Hermitian nano-optomechanical networks and their sensing performanceWork ActivitiesThe Photonic Forces group seeks a motivated and talented PhD student working at the intersection of the fields of nano-optomechanics and topological physics. Nanomechanical resonators are versatile systems for sensing applications and to study fundamental physical...


  • Amsterdam, Noord-Holland, Nederland Universiteit van Amsterdam Voltijd

    What are you going to do ? M imicking filamentous network structures to exhibit specific physical and sensory properties are desirable for a wide range of applications from meat analogues to artificial tissues for implants. Yet, besides progress in synthesizing or assembling ever more complex bio-inspired structures, manufacturing filamentous...


  • Amsterdam, Noord-Holland, Nederland VU Amsterdam Voltijd

    Your functionDespite decades of dedicated collaborative efforts, we are still missing key elements to develop the perfect electronic nose. A major obstacle is our limited understanding of how the sense of smell works, and how odorant sensors should be designed for smell detection. The project ODORWISE joins advanced computer simulation techniques together...


  • Amsterdam, Noord-Holland, Nederland ARCNL Voltijd

    PhD- student: Resolving Surface Reactions in Plasma Catalysis (SURPLAS)Work ActivitiesSurface reactions on metal model catalysts in plasma environmentActivation of molecules in a plasma can form the basis for efficient chemical reactions making direct use of electrical energy. The interaction of plasma-activated species with a catalyst enhances the...


  • Amsterdam, Noord-Holland, Nederland AMOLF Voltijd

    Phd - student: Nonlinear metaphotonics for UV semiconductor metrologyWork ActivitiesHow do you design optical metasurfaces that efficiently radiate UV light by nonlinear frequency conversion? How do the geometry of meta-atoms and their arrangement in the metasurface translate into beam structuring, i.e., control over the amplitude, phase and polarization...


  • Amsterdam, Noord-Holland, Nederland Vrije Universiteit Amsterdam Voltijd

    ODORWISE - Unravelling Odorant Detection Mechanisms for Biosensors in Sustainable Healthcare. If you are interested to join this exciting research in olfactory science and bioinformatics, please apply to Vrije Universiteit Amsterdam. Your functionDespite decades of dedicated collaborative efforts, we are still missing key elements to develop the perfect...


  • Amsterdam, Noord-Holland, Nederland ARCNL Voltijd

    Work ActivitiesIn semiconductor device manufacturing, metrology tools are required for wafer alignment, overlay and device inspection. As devices become more complicated and as stronger light sources are being used to get sufficient signal from samples covered with optically opaque layers, optical damage can occur. Catastrophic damage is easily detected....


  • Amsterdam, Noord-Holland, Nederland University of Amsterdam Voltijd

    Are you enthusiastic about exploring the fascinating interplay between physics and mechanics? We are delighted to offer two exciting postdoctoral positions in the Machine Materials Laboratory, and in the Fluidlab, located at the Institute of Physics of the University of Amsterdam.This unique research opportunity revolves around the fields of active matter,...


  • Amsterdam, Noord-Holland, Nederland AMOLF Voltijd

    Postdoc: Nanophotonics and quantum physics with electrons and lightWork ActivitiesDid you know high-energy electrons can serve as efficient sources of optical excitation of matter? Our group has developed cathodoluminescence microscopy, in which we use 1-30 keV electrons in a scanning electron microscope (SEM) to excite nanomaterials. The oscillating...